BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E08SP1|AL426540
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1355 1567 0.0
>3x_Contig1355
Length = 8652
Score = 1567 bits (786), Expect = 0.0
Identities = 807/816 (98%), Gaps = 2/816 (0%)
Strand = Plus / Plus
Query: 1 gatcatgttagtgctgttatggatgttgatttttcccctactggtgacgaakt-gtaaca 59
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 513 gatcatgttagtgctgttatggatgttgatttttcccctactggtgacgaagttgtaaca 572
Query: 60 ggctcctatgataagacaatcagaatttaccaagttaaacatggtcattcgagagaaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggctcctatgataagacaatcagaatttaccaagttaaacatggtcattcgagagaaata 632
Query: 120 tatcatacaaagagaatgcagcatattttccaagtgaaatataccatggacagtaagtat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 tatcatacaaagagaatgcagcatattttccaagtgaaatataccatggacagtaagtat 692
Query: 180 atagtaagtggttcagatgatggtaacgttagactatggagagccaaggcatgggagaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 atagtaagtggttcagatgatggtaacgttagactatggagagccaaggcatgggagaga 752
Query: 240 tctaatgcgaagagtacacgtgaaaagaataagttggaatacgatgaaaaacttaaagaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 753 tctaatgcgaagagtacacgtgaaaagaataagttggaatacgatgaaaaacttaaagaa 812
Query: 300 agattcaagcacatgccagaggtcagaagaattagcaggcacagacacgtccctaaggtt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 813 agattcaagcacatgccagaggtcagaagaattagcaggcacagacacgtccctaaggtt 872
Query: 360 gttaagaaagctcaagagattaagaagattgamattgattctttgaagagaagggaaaga 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 873 gttaagaaagctcaagagattaagaagattgaaattgattctttgaagagaagggaaaga 932
Query: 420 aacgaaagamagacaaggaaagacatgccatttttacctgama-gaagaaacaaatcgtc 478
||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 933 aacgaaagaaagacaaggaaagacatgccatttttacctgaaaggaagaaacaaatcgtc 992
Query: 479 ggtactgtctttcaatacgaggacgacaagaaatctaattcgaatagatccaacgattcc 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 993 ggtactgtctttcaatacgaggacgacaagaaatctaattcgaatagatccaacgattcc 1052
Query: 539 gaagatgaataahatatatgamtttctatcagttttgaattagatatttataaatttgtm 598
|||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1053 gaagatgaataaaatatatgaatttctatcagttttgaattagatatttataaatttgta 1112
Query: 599 acgttaataagctcgaaacatgtctcttttttcttgaagttataaatcaaggtagttgat 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1113 acgttaataagctcgaaacatgtctcttttttcttgaagttataaatcaaggtagttgat 1172
Query: 659 caagttttcctttcaatgaaaaatcgtttttagcaaggaactatcttttaccgagattag 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1173 caagttttcctttcaatgaaaaatcgtttttagcaaggaactatcttttaccgagattag 1232
Query: 719 cagatatcttctttataatttgaatcatgggttgcatgtaacgaattgaatcctttcata 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1233 cagatatcttctttataatttgaatcatgggttgcatgtaacgaattgaatcctttcata 1292
Query: 779 ttcttttacagtattagattagaagtatagttccat 814
||||||||||||||||||||||||||||||||||||
Sbjct: 1293 ttcttttacagtattagattagaagtatagttccat 1328
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7212
Number of Sequences: 1807
Number of extensions: 7212
Number of successful extensions: 68
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)